tissue microarray database

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Tissue Microarrays Are an Effective Quality Assurance Tool ...- tissue microarray database ,Dec 01, 2002·The staining patterns observed on our multiple-tumor tissue microarray were in agreement with published data in a large majority of cases in which published data exist, and our complete set of ...Tissue Microarray - CD MicroarrayCD Microarray is a leading global company who can provide the best solution for worldwide customers in the field of Tissue Microarray. We have successfully accomplished many projects. We guarantee the finest results for our customers all over the world. With the increasing application of next-generation sequencing (NGS) technology in tumors, gene sequencing and analyzing of tumors are no ...



Currently Available Tissue Microarrays | Cooperative Human ...

Description: CHTN Test Tissue Microarrays contain lymphoid, epithelial and stromal tissue (spleen, colonic mucosa, prostate, liver, breast cancer and uterine …

The Stanford Tissue Microarray Database - Europe PMC ...

Several database object models (3,4) and systems have been described for managing tissue microarray data. Goals range from metadata modeling to comprehensive management of tissue microarrays for large research groups. While there are similarities, TMAD differs by providing public access to raw tissue microarray experiment data.

Screening and identification of muscle-specific candidate ...

Aug 12, 2021·Mouse tissue microarray data from 17 tissue samples was selected from the GEO database for analysis. Muscle tissue as the treatment group, and the other 16 tissues as the control group. Genes expressed in the muscle tissue were different to those in the other 16 tissues and identified 272 differential genes with highly specific expression in ...

Tissue microarray software, data analysis of tissue ...

Tissue Microarray Software for Data Analysis "TMA Foresight is an excellent program. The analysis which took me years to do manually, could now be completed in just one minute." - N. Makretsov MD PhD, Clinical Research Fellow, Department of Oncology, University of Cambridge, UK.

A curated collection of tissue microarray images and ...

Mar 14, 2017·To benchmark the ISHProfiler, we have analysed a large number of stained tissue microarray (TMA) images with associated clinical data 6. Here, we provide a more detailed description of these data ...

Novel Relational Database for Tissue Microarray Analysis ...

Apr 01, 2003·Stepwise construction of the tissue microarray (TMA), starting from the database containing 9 cases (pathology numbers are fictitious): (1) cases in the database, (2) layout of the TMA, (3) position of each core, and (4) actual TMA (hematoxylin-eosin, original magnification ×1). Figure 2.

Microarray, SAGE and other gene expression databases | HSLS

TMAD -- The Stanford Tissue Microarray Database. Find annotated tissue images and associated expression data. The Center for Modeling Human Disease Gene Trap resource. Search for insertions in genes (Gene trap mutagenesis) expressed in mouse embryonic stem cells, under specific in vitro conditions, or based upon sequence identity via an online ...

Stanford TMA Consortium Web Portal -- Home

The tissue microarray images in this portal are part of the Stanford Tissue Microarray Database. Here in the portal you can access web supplements of tissue microarray-based papers that contain a browsable GeneExplorer-based scoring cluster and image database, along with any additional supporting material.

The Stanford Tissue Microarray Database. - Abstract ...

Nov 07, 2007·Several database object models (3,4) and systems have been described for managing tissue microarray data. Goals range from metadata modeling to comprehensive management of tissue microarrays for large research groups. While there are similarities, TMAD differs by providing public access to raw tissue microarray experiment data.

Tumor Tissue Microarray - CD Microarray

Tumor Tissue Microarray. CD Microarray is a world-leading company that can provide the best solutions for global customers in the field of human tissue microarrays. We have successfully completed many human tumor tissue microarray projects, and strive to provide the …

Tissue microarray - Wikipedia

The use of tissue microarrays in combination with immunohistochemistry has been a preferred method to study and validate cancer biomarkers in various defined cancer patient cohorts.The possibility to assemble a large number of representative cancer samples from a defined patient cohort that also has a corresponding clinical database, provides a powerful resource to study how different protein ...

TriStar Tissue Microarrays

Colon Cancer 100 With Molecular Data Tissue Microarray. Colorectal Cancer (CRC) Tissue Microarrays > Single 1mm Cores. SKU: 69571102-1462. Approx. # of Cores: 100; Approx. # of Donors: 100; Follow Up Data: No

The tissue microarray data exchange specification: A ...

May 23, 2003·Tissue Microarrays (TMAs) allow researchers to examine hundreds of small tissue samples on a single glass slide. The information held in a single TMA slide may easily involve Gigabytes of data. To benefit from TMA technology, the scientific community needs an open source TMA data exchange specification that will convey all of the data in a TMA experiment in a format that is understandable to ...

SPOTLIGHT: Tissue Microarray and Imaging Core - DF/HCC

In this DF/HCC News Spotlight Edition, we present The DF/HCC Tissue Microarray and Imaging Core, which is dedicated to the construction, imaging, and analysis of high-quality tissue microarrays (TMAs) for cancer research.Access to this technology and these tissue-based resources is key to the advancement of cancer research at DF/HCC.

Residual Tissue Repository (RTR) Program

Oct 27, 2010·Permits updating of survival data after a tissue microarray (TMA) is formed without violating privacy protections. Return to top. Participating Registries. The following three registries have on-site residual tissue repositories, as well as virtual repositories (specimens housed at …

The tissue microarray OWL schema: An open-source tool for ...

Background: Tissue microarrays (TMAs) are enormously useful tools for translational research, but incompatibilities in database systems between various researchers and institutions prevent the efficient sharing of data that could help realize their full potential. Resource Description Framework (RDF) provides a flexible method to represent knowledge in triples, which take the form Subject ...

Cruella: Developing a Scalable Tissue Microarray Data ...

Jun 01, 2006·This article describes the implementation of a tissue microarray data management system, nicknamed Cruella, which is based on a hybrid entity-attribute-value (EAV) relational data schema, using object-relational mapping techniques, a custom, Java-based persistence layer to encapsulate the complexities of database interactions, and with a Web ...

The Stanford Tissue Microarray Database

The Stanford Tissue Microarray Database Nucleic Acids Res. 2008 Jan;36(Database issue):D871-7. doi: 10.1093/nar/gkm861. Epub 2007 Nov 7. Authors Robert J Marinelli 1 …

TMAD -- The Stanford Tissue Microarray Database | HSLS

Apr 18, 2014·TMAD archives multi-wavelength fluorescence and bright-field images of tissue microarrays for scoring and analysis. As of July 2007, TMAD contained 205 161 images …

A curated collection of tissue microarray images and ...

Mar 14, 2017·To benchmark the ISHProfiler, we have analysed a large number of stained tissue microarray (TMA) images with associated clinical data 6. Here, we provide a more detailed description of these data ...

Oncology Tissue Services of Johns Hopkins University

The Tissue Microarray Data Exchange Specification a community-based, open source tool for sharing tissue microarray data. Contact Location: TMA Laboratory Johns Hopkins Pathology 411 N. Caroline Street Basement Room #312 Baltimore, MD 21231 For inquiries, please contact: Helen Fedor

Tissue Microarray (TMA) - Cancer and Normal Arrays | OriGene

Tissue Microarray (TMA) Quality tissue arrays for your high-throughput molecular analysis Tissue microarrays (TMAs) are created from high-quality tissue …

Tissue Microarray (TMA) - ProteoGenex

Tissue Microarray (TMA) ProteoGenex provides custom-designed Tissue Microarrays (TMAs) for target expression and biomarker analysis in diseased, normal adjacent, and normal tissues. ProteoGenex constructs each TMA using carefully selected donors’ FFPE tissues. Our pathologists analyze each tissue’s morphology prior to tissue core removal.

Tissue Microarray - CD Microarray

CD Microarray is a leading global company who can provide the best solution for worldwide customers in the field of Tissue Microarray. We have successfully accomplished many projects. We guarantee the finest results for our customers all over the world. With the increasing application of next-generation sequencing (NGS) technology in tumors, gene sequencing and analyzing of tumors are no ...

DNA Microarray Technology Fact Sheet - Genome.gov

Aug 15, 2020·Microarrays can also be used to study the extent to which certain genes are turned on or off in cells and tissues. In this case, instead of isolating DNA from the samples, RNA (which is a transcript of the DNA) is isolated and measured. Today, DNA microarrays …

Tissue Microarrays Are an Effective Quality Assurance Tool ...

Dec 01, 2002·The staining patterns observed on our multiple-tumor tissue microarray were in agreement with published data in a large majority of cases in which published data exist, and our complete set of ...

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